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JNHE01000016_gene4474 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000016_gene4474" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000016_gene4474annotation not available (736 aa)    
Predicted Functional Partners:
arcA
annotation not available (416 aa)
   
 
  0.911
aguA
Agmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine (368 aa)
       
  0.898
argH
annotation not available (464 aa)
         
  0.861
speA
Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine (637 aa)
         
  0.861
JNHE01000002_gene2117
annotation not available (250 aa)
     
  0.859
JNHE01000003_gene1797
annotation not available (338 aa)
     
 
  0.857
JNHE01000003_gene1796
annotation not available (338 aa)
     
 
  0.845
JNHE01000001_gene193
annotation not available (387 aa)
       
  0.828
JNHE01000018_gene3857
annotation not available (319 aa)
     
  0.827
JNHE01000043_gene3242
annotation not available (293 aa)
   
 
  0.797
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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