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JNHE01000016_gene4529 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000016_gene4529" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000016_gene4529annotation not available (302 aa)    
Predicted Functional Partners:
JNHE01000016_gene4528
annotation not available (228 aa)
 
   
  0.954
JNHE01000016_gene4525
annotation not available (101 aa)
 
          0.875
JNHE01000016_gene4527
annotation not available (77 aa)
              0.796
JNHE01000016_gene4524
annotation not available (156 aa)
 
          0.746
JNHE01000021_gene4039
annotation not available (367 aa)
         
  0.721
rpoH
annotation not available (264 aa)
     
 
  0.697
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (602 aa)
     
 
  0.697
rpoS
annotation not available (316 aa)
     
 
  0.697
JNHE01000022_gene2590
annotation not available (92 aa)
       
 
  0.681
himD
Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control (94 aa)
       
 
  0.681
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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