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JNHE01000016_gene4537 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000016_gene4537" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000016_gene4537annotation not available (611 aa)    
Predicted Functional Partners:
JNHE01000001_gene252
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (489 aa)
 
     
  0.763
JNHE01000081_gene1348
annotation not available (436 aa)
     
 
  0.699
JNHE01000026_gene3076
annotation not available (484 aa)
     
 
  0.699
JNHE01000015_gene4378
annotation not available (497 aa)
     
 
  0.699
JNHE01000015_gene4375
annotation not available (483 aa)
     
 
  0.699
JNHE01000015_gene4365
annotation not available (486 aa)
     
 
  0.699
JNHE01000013_gene2795
annotation not available (488 aa)
     
 
  0.699
JNHE01000010_gene3516
annotation not available (496 aa)
     
 
  0.699
JNHE01000008_gene3765
annotation not available (502 aa)
     
 
  0.699
betB
NAD/NADP-dependent betaine aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid (490 aa)
     
 
  0.699
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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