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JNHE01000017_gene4580 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000017_gene4580" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000017_gene4580annotation not available (399 aa)    
Predicted Functional Partners:
JNHE01000017_gene4579
annotation not available (579 aa)
 
        0.944
JNHE01000017_gene4578
annotation not available (537 aa)
 
        0.787
JNHE01000025_gene2842
annotation not available (482 aa)
     
      0.644
nagZ
Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides; Belongs to the glycosyl hydrolase 3 family. NagZ subfamily (326 aa)
   
   
  0.566
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily (683 aa)
         
  0.558
JNHE01000002_gene2291
annotation not available (768 aa)
         
  0.501
JNHE01000017_gene4581
annotation not available (907 aa)
              0.483
JNHE01000017_gene4582
annotation not available (93 aa)
              0.473
JNHE01000053_gene2687
annotation not available (566 aa)
           
  0.418
JNHE01000022_gene2644
annotation not available (216 aa)
           
  0.418
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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