STRINGSTRING
JNHE01000017_gene4582 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000017_gene4582" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000017_gene4582annotation not available (93 aa)    
Predicted Functional Partners:
JNHE01000017_gene4581
annotation not available (907 aa)
              0.709
JNHE01000025_gene2858
annotation not available (391 aa)
   
        0.705
JNHE01000001_gene272
annotation not available (135 aa)
   
          0.614
JNHE01000007_gene1308
Heme exporter protein D; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes (58 aa)
 
          0.599
JNHE01000012_gene1361
annotation not available (135 aa)
   
          0.586
JNHE01000006_gene1030
annotation not available (528 aa)
   
          0.583
JNHE01000001_gene333
annotation not available (95 aa)
   
          0.573
JNHE01000014_gene2968
annotation not available (411 aa)
   
          0.564
JNHE01000034_gene4191
annotation not available (263 aa)
   
          0.557
JNHE01000050_gene2718
annotation not available (84 aa)
   
          0.529
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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