STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000017_gene4612annotation not available (123 aa)    
Predicted Functional Partners:
JNHE01000017_gene4611
annotation not available
 
  
 0.960
JNHE01000017_gene4613
annotation not available
 
     0.899
sstT
Serine/threonine transporter SstT; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
   
   0.715
JNHE01000002_gene2188
annotation not available
  
     0.619
JNHE01000006_gene1139
annotation not available
  
  
 0.592
JNHE01000003_gene2019
annotation not available
  
     0.583
JNHE01000032_gene908
annotation not available
  
    0.576
JNHE01000001_gene447
annotation not available
  
     0.571
JNHE01000025_gene2872
annotation not available
  
     0.561
JNHE01000001_gene125
annotation not available
  
     0.558
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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