STRINGSTRING
JNHE01000018_gene3845 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000018_gene3845" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000018_gene3845annotation not available (371 aa)    
Predicted Functional Partners:
JNHE01000014_gene2909
annotation not available (1663 aa)
 
 
 
  0.882
JNHE01000021_gene4088
annotation not available (1167 aa)
 
 
 
0.762
JNHE01000033_gene940
annotation not available (635 aa)
 
 
  0.760
JNHE01000001_gene439
annotation not available (75 aa)
   
          0.693
JNHE01000002_gene2402
annotation not available (635 aa)
   
     
  0.664
JNHE01000021_gene4087
annotation not available (113 aa)
 
          0.661
JNHE01000031_gene670
annotation not available (492 aa)
   
          0.661
JNHE01000018_gene3846
annotation not available (429 aa)
 
     
  0.658
JNHE01000029_gene741
annotation not available (81 aa)
   
          0.655
JNHE01000018_gene3847
annotation not available (719 aa)
 
     
  0.645
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
Server load: low (15%) [HD]