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JNHE01000018_gene3856 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000018_gene3856" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000018_gene3856annotation not available (240 aa)    
Predicted Functional Partners:
JNHE01000018_gene3855
annotation not available (504 aa)
 
          0.867
JNHE01000018_gene3852
annotation not available (280 aa)
 
   
  0.833
JNHE01000009_gene3282
annotation not available (240 aa)
       
  0.790
fbp
annotation not available (335 aa)
   
 
  0.762
JNHE01000003_gene1879
annotation not available (488 aa)
       
  0.730
mtnA
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) (358 aa)
   
 
  0.691
JNHE01000018_gene3854
annotation not available (266 aa)
              0.688
JNHE01000018_gene3853
annotation not available (344 aa)
 
          0.677
JNHE01000001_gene175
annotation not available (306 aa)
   
 
  0.619
JNHE01000006_gene1134
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate (666 aa)
       
  0.612
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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