STRINGSTRING
JNHE01000018_gene3868 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000018_gene3868" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000018_gene3868annotation not available (351 aa)    
Predicted Functional Partners:
JNHE01000004_gene1650
annotation not available (903 aa)
   
          0.609
JNHE01000004_gene1668
annotation not available (226 aa)
   
          0.577
JNHE01000009_gene3373
annotation not available (186 aa)
   
          0.553
JNHE01000002_gene2272
annotation not available (57 aa)
   
          0.550
JNHE01000004_gene1715
annotation not available (151 aa)
   
          0.541
JNHE01000018_gene3869
annotation not available (174 aa)
              0.519
JNHE01000018_gene3872
annotation not available (157 aa)
              0.500
JNHE01000018_gene3871
annotation not available (166 aa)
              0.500
JNHE01000018_gene3870
annotation not available (257 aa)
              0.500
JNHE01000004_gene1658
annotation not available (184 aa)
   
          0.493
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
Server load: low (13%) [HD]