STRINGSTRING
JNHE01000018_gene3891 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000018_gene3891" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000018_gene3891annotation not available (159 aa)    
Predicted Functional Partners:
JNHE01000036_gene4324
annotation not available (109 aa)
   
          0.767
JNHE01000004_gene1639
annotation not available (183 aa)
   
          0.765
JNHE01000030_gene646
annotation not available (50 aa)
   
          0.744
JNHE01000009_gene3340
annotation not available (90 aa)
   
          0.685
JNHE01000028_gene812
annotation not available (193 aa)
   
          0.675
JNHE01000002_gene2142
annotation not available (91 aa)
   
          0.674
JNHE01000003_gene1955
annotation not available (191 aa)
   
          0.660
JNHE01000032_gene917
annotation not available (232 aa)
   
          0.645
JNHE01000001_gene204
annotation not available (135 aa)
   
          0.639
JNHE01000001_gene498
annotation not available (78 aa)
   
          0.636
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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