STRINGSTRING
JNHE01000018_gene3898 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000018_gene3898" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000018_gene3898annotation not available (41 aa)    
Predicted Functional Partners:
JNHE01000018_gene3899
annotation not available (390 aa)
              0.845
JNHE01000018_gene3897
annotation not available (183 aa)
              0.650
JNHE01000018_gene3900
annotation not available (124 aa)
              0.589
JNHE01000018_gene3896
annotation not available (309 aa)
              0.427
cobT
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5’-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) (324 aa)
              0.413
JNHE01000018_gene3902
annotation not available (190 aa)
              0.413
JNHE01000018_gene3901
annotation not available (243 aa)
              0.413
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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