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JNHE01000019_gene4162 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000019_gene4162" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000019_gene4162annotation not available (298 aa)    
Predicted Functional Partners:
ppc
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family (878 aa)
         
  0.697
JNHE01000015_gene4397
annotation not available (306 aa)
   
          0.697
JNHE01000019_gene4163
annotation not available (370 aa)
 
     
  0.685
JNHE01000019_gene4161
annotation not available (107 aa)
              0.565
JNHE01000019_gene4164
annotation not available (280 aa)
 
          0.560
JNHE01000001_gene356
annotation not available (296 aa)
   
          0.441
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (333 aa)
     
      0.431
JNHE01000034_gene4190
annotation not available (312 aa)
   
   
  0.420
JNHE01000034_gene4201
annotation not available (329 aa)
     
        0.414
JNHE01000012_gene1467
annotation not available (321 aa)
     
        0.414
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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