STRINGSTRING
JNHE01000020_gene3947 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000020_gene3947" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000020_gene3947annotation not available (283 aa)    
Predicted Functional Partners:
JNHE01000020_gene3946
annotation not available (313 aa)
 
  0.998
JNHE01000025_gene2847
annotation not available (334 aa)
 
  0.988
JNHE01000020_gene3952
annotation not available (132 aa)
 
   
  0.958
JNHE01000020_gene3953
annotation not available (421 aa)
 
   
  0.956
JNHE01000020_gene3948
annotation not available (244 aa)
 
   
  0.933
JNHE01000020_gene3949
annotation not available (154 aa)
 
   
  0.930
JNHE01000007_gene1297
annotation not available (269 aa)
   
 
  0.919
JNHE01000020_gene3950
annotation not available (358 aa)
 
   
  0.913
JNHE01000049_gene1484
annotation not available (455 aa)
 
   
  0.899
JNHE01000049_gene1483
annotation not available (305 aa)
 
   
  0.880
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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