STRINGSTRING
JNHE01000020_gene3962 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000020_gene3962" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000020_gene3962annotation not available (276 aa)    
Predicted Functional Partners:
JNHE01000020_gene3961
annotation not available (144 aa)
 
          0.847
JNHE01000002_gene2272
annotation not available (57 aa)
   
          0.650
JNHE01000020_gene3964
annotation not available (598 aa)
 
        0.626
JNHE01000013_gene2757
annotation not available (153 aa)
 
        0.558
JNHE01000020_gene3963
annotation not available (450 aa)
              0.514
JNHE01000055_gene1775
annotation not available (222 aa)
 
        0.492
JNHE01000006_gene1139
annotation not available (121 aa)
   
        0.492
JNHE01000002_gene2172
annotation not available (907 aa)
   
          0.477
JNHE01000001_gene123
annotation not available (160 aa)
   
          0.459
JNHE01000009_gene3273
annotation not available (65 aa)
 
        0.457
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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