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JNHE01000020_gene3973 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000020_gene3973" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000020_gene3973annotation not available (263 aa)    
Predicted Functional Partners:
JNHE01000020_gene3974
annotation not available (196 aa)
   
        0.885
nagZ
Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides; Belongs to the glycosyl hydrolase 3 family. NagZ subfamily (326 aa)
   
 
  0.884
JNHE01000025_gene2840
annotation not available (458 aa)
         
  0.861
JNHE01000006_gene1199
annotation not available (298 aa)
       
  0.788
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP (399 aa)
   
   
    0.785
JNHE01000018_gene3913
annotation not available (216 aa)
       
  0.770
JNHE01000011_gene3621
annotation not available (391 aa)
         
  0.744
JNHE01000026_gene3055
annotation not available (356 aa)
   
 
  0.507
JNHE01000016_gene4479
annotation not available (504 aa)
       
  0.503
JNHE01000011_gene3625
annotation not available (418 aa)
       
  0.502
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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