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JNHE01000020_gene3983 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000020_gene3983" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000020_gene3983annotation not available (87 aa)    
Predicted Functional Partners:
thrB
annotation not available (316 aa)
 
        0.869
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (931 aa)
              0.733
JNHE01000003_gene1884
annotation not available (175 aa)
   
          0.532
bamE
Outer membrane protein assembly factor BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (114 aa)
   
          0.521
JNHE01000018_gene3918
annotation not available (61 aa)
   
          0.510
JNHE01000001_gene255
annotation not available (188 aa)
   
          0.507
JNHE01000006_gene1211
annotation not available (454 aa)
   
          0.481
JNHE01000019_gene4123
annotation not available (123 aa)
   
          0.446
JNHE01000001_gene346
annotation not available (303 aa)
   
          0.419
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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