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JNHE01000020_gene3988 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000020_gene3988" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000020_gene3988annotation not available (192 aa)    
Predicted Functional Partners:
JNHE01000020_gene3989
annotation not available (242 aa)
   
  0.995
JNHE01000020_gene3987
annotation not available (351 aa)
 
 
  0.985
JNHE01000020_gene3994
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (366 aa)
 
 
  0.933
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily (301 aa)
 
   
  0.929
JNHE01000020_gene3992
annotation not available (188 aa)
 
 
  0.904
JNHE01000020_gene3990
annotation not available (67 aa)
 
          0.882
JNHE01000028_gene812
annotation not available (193 aa)
   
 
      0.843
JNHE01000003_gene1955
annotation not available (191 aa)
   
 
      0.796
JNHE01000017_gene4595
annotation not available (90 aa)
   
 
      0.787
JNHE01000020_gene3991
annotation not available (295 aa)
 
   
  0.774
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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