STRINGSTRING
JNHE01000020_gene3995 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000020_gene3995" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000020_gene3995annotation not available (213 aa)    
Predicted Functional Partners:
JNHE01000012_gene1455
annotation not available (256 aa)
   
          0.706
JNHE01000001_gene160
annotation not available (209 aa)
   
          0.682
JNHE01000018_gene3891
annotation not available (159 aa)
   
          0.598
JNHE01000002_gene2084
annotation not available (204 aa)
   
          0.570
JNHE01000001_gene272
annotation not available (135 aa)
   
          0.549
JNHE01000015_gene4404
annotation not available (108 aa)
   
          0.532
JNHE01000008_gene3756
annotation not available (394 aa)
   
          0.516
JNHE01000001_gene204
annotation not available (135 aa)
   
          0.513
JNHE01000010_gene3439
annotation not available (249 aa)
   
          0.510
JNHE01000004_gene1639
annotation not available (183 aa)
   
          0.505
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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