STRINGSTRING
JNHE01000020_gene3998 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000020_gene3998" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000020_gene3998annotation not available (131 aa)    
Predicted Functional Partners:
JNHE01000015_gene4388
annotation not available (115 aa)
 
   
  0.744
JNHE01000021_gene4039
annotation not available (367 aa)
       
  0.719
JNHE01000020_gene3988
annotation not available (192 aa)
       
      0.678
JNHE01000020_gene3985
annotation not available (196 aa)
       
      0.678
JNHE01000023_gene2555
annotation not available (119 aa)
 
   
  0.675
glsA
annotation not available (302 aa)
   
        0.646
JNHE01000011_gene3653
annotation not available (322 aa)
 
 
  0.550
JNHE01000026_gene3102
annotation not available (409 aa)
       
    0.530
rph
Ribonuclease PH; Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates (239 aa)
       
    0.524
JNHE01000013_gene2803
annotation not available (323 aa)
 
 
  0.521
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
Server load: low (10%) [HD]