STRINGSTRING
JNHE01000021_gene4027 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000021_gene4027" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000021_gene4027annotation not available (517 aa)    
Predicted Functional Partners:
JNHE01000021_gene4026
annotation not available (349 aa)
 
  0.996
JNHE01000025_gene2862
annotation not available (480 aa)
       
  0.828
JNHE01000009_gene3402
annotation not available (329 aa)
   
 
  0.660
JNHE01000001_gene176
annotation not available (575 aa)
     
 
  0.659
JNHE01000021_gene4025
annotation not available (295 aa)
   
      0.644
JNHE01000001_gene431
annotation not available (399 aa)
   
     
  0.611
JNHE01000010_gene3523
annotation not available (583 aa)
   
 
  0.581
JNHE01000008_gene3743
annotation not available (457 aa)
   
   
  0.555
JNHE01000002_gene2400
annotation not available (293 aa)
 
 
  0.553
JNHE01000039_gene60
annotation not available (104 aa)
           
  0.538
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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