STRINGSTRING
JNHE01000021_gene4050 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000021_gene4050" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000021_gene4050annotation not available (313 aa)    
Predicted Functional Partners:
JNHE01000006_gene1029
annotation not available (1441 aa)
     
 
  0.920
JNHE01000035_gene4243
annotation not available (403 aa)
 
 
  0.916
JNHE01000029_gene727
annotation not available (1215 aa)
       
  0.892
JNHE01000001_gene438
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family (1311 aa)
   
 
  0.869
speA
Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine (637 aa)
   
  0.864
JNHE01000021_gene4049
annotation not available (241 aa)
 
   
  0.846
hutH
annotation not available (513 aa)
 
 
  0.829
JNHE01000021_gene4051
annotation not available (403 aa)
 
        0.827
argA
annotation not available (432 aa)
   
 
  0.801
argG
annotation not available (405 aa)
     
 
  0.776
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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