STRINGSTRING
JNHE01000021_gene4054 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000021_gene4054" - Segregation and condensation protein A in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000021_gene4054Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves (271 aa)    
Predicted Functional Partners:
JNHE01000021_gene4052
annotation not available (265 aa)
 
 
  0.992
smc
Chromosome partition protein Smc; Required for chromosome condensation and partitioning; Belongs to the SMC family (1162 aa)
 
 
 
  0.951
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily (683 aa)
     
      0.805
JNHE01000034_gene4177
annotation not available (943 aa)
     
 
  0.784
JNHE01000032_gene895
annotation not available (257 aa)
     
 
  0.784
JNHE01000021_gene4055
annotation not available (391 aa)
              0.763
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2’-deoxyuridine- 5’-monophosphate (dUMP) to 2’-deoxythymidine-5’-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis (264 aa)
       
  0.711
JNHE01000026_gene3086
annotation not available (801 aa)
   
      0.709
JNHE01000021_gene4053
annotation not available (297 aa)
              0.703
JNHE01000021_gene4056
annotation not available (202 aa)
              0.615
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
Server load: low (24%) [HD]