STRINGSTRING
JNHE01000022_gene2627 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000022_gene2627" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000022_gene2627annotation not available (190 aa)    
Predicted Functional Partners:
JNHE01000022_gene2628
annotation not available (544 aa)
 
          0.904
JNHE01000022_gene2626
annotation not available (226 aa)
 
          0.877
JNHE01000003_gene2003
annotation not available (190 aa)
   
 
  0.857
JNHE01000003_gene2002
annotation not available (256 aa)
   
 
  0.789
JNHE01000007_gene1246
annotation not available (400 aa)
       
      0.752
JNHE01000030_gene628
annotation not available (324 aa)
   
 
  0.733
JNHE01000022_gene2602
annotation not available (319 aa)
   
 
  0.733
JNHE01000018_gene3880
annotation not available (316 aa)
   
 
  0.733
JNHE01000013_gene2766
annotation not available (313 aa)
   
 
  0.733
JNHE01000013_gene2763
annotation not available (315 aa)
   
 
  0.733
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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