STRINGSTRING
JNHE01000025_gene2845 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000025_gene2845" - annotation not available in Pseudomonas oleovorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000025_gene2845annotation not available (257 aa)    
Predicted Functional Partners:
JNHE01000018_gene3888
annotation not available (226 aa)
   
  0.869
JNHE01000013_gene2791
16S rRNA m(5)C-967 methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA (437 aa)
   
 
  0.799
ksgA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (269 aa)
   
   
  0.784
orn
Oligoribonuclease; 3’-to-5’ exoribonuclease specific for small oligoribonucleotides (180 aa)
              0.781
JNHE01000019_gene4166
annotation not available (352 aa)
   
 
  0.753
JNHE01000011_gene3663
annotation not available (845 aa)
   
      0.738
JNHE01000003_gene1957
annotation not available (1348 aa)
   
      0.738
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (87 aa)
   
   
  0.716
JNHE01000011_gene3634
annotation not available (330 aa)
     
      0.708
JNHE01000036_gene4301
annotation not available (469 aa)
     
      0.696
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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