STRINGSTRING
JNHE01000025_gene2879 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000025_gene2879" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000025_gene2879annotation not available (125 aa)    
Predicted Functional Partners:
JNHE01000039_gene51
annotation not available (752 aa)
   
 
  0.853
JNHE01000006_gene1030
annotation not available (528 aa)
 
 
 
  0.807
JNHE01000009_gene3385
annotation not available (178 aa)
   
  0.790
JNHE01000034_gene4191
annotation not available (263 aa)
 
 
 
  0.785
JNHE01000007_gene1335
annotation not available (308 aa)
   
 
  0.772
JNHE01000025_gene2853
annotation not available (689 aa)
       
  0.644
JNHE01000007_gene1277
annotation not available (562 aa)
       
  0.562
hldE
Bifunctional protein HldE; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose; In the N-terminal section; belongs to the carbohydrate kinase PfkB family (473 aa)
       
  0.552
JNHE01000057_gene106
annotation not available (585 aa)
   
 
  0.532
JNHE01000007_gene1260
annotation not available (1852 aa)
       
  0.500
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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