STRINGSTRING
JNHE01000026_gene3083 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000026_gene3083" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000026_gene3083annotation not available (326 aa)    
Predicted Functional Partners:
JNHE01000026_gene3082
annotation not available (415 aa)
 
  0.967
JNHE01000026_gene3081
annotation not available (275 aa)
 
 
  0.943
JNHE01000026_gene3084
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system (365 aa)
 
  0.918
JNHE01000040_gene93
annotation not available (284 aa)
 
 
  0.897
JNHE01000040_gene92
annotation not available (411 aa)
 
  0.863
JNHE01000047_gene1534
annotation not available (265 aa)
   
 
  0.741
JNHE01000040_gene90
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system (372 aa)
 
  0.658
JNHE01000010_gene3511
annotation not available (286 aa)
 
 
  0.639
JNHE01000006_gene1212
annotation not available (296 aa)
 
 
  0.634
JNHE01000047_gene1533
annotation not available (328 aa)
 
 
  0.631
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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