STRINGSTRING
JNHE01000026_gene3089 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000026_gene3089" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000026_gene3089annotation not available (223 aa)    
Predicted Functional Partners:
JNHE01000026_gene3090
annotation not available (341 aa)
 
  0.997
JNHE01000013_gene2817
annotation not available (176 aa)
 
 
  0.973
JNHE01000028_gene842
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3’ and C5’positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose; Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family (182 aa)
 
  0.955
hldE
Bifunctional protein HldE; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose; In the N-terminal section; belongs to the carbohydrate kinase PfkB family (473 aa)
   
 
  0.947
JNHE01000026_gene3088
annotation not available (252 aa)
   
        0.917
JNHE01000039_gene51
annotation not available (752 aa)
   
 
  0.887
JNHE01000031_gene680
annotation not available (476 aa)
   
 
  0.866
JNHE01000001_gene365
annotation not available (476 aa)
   
 
  0.866
JNHE01000014_gene3000
annotation not available (650 aa)
     
  0.863
JNHE01000028_gene840
annotation not available (353 aa)
 
 
  0.861
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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