STRINGSTRING
pqqD protein (Pseudomonas oleovorans) - STRING interaction network
"pqqD" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pqqDannotation not available (92 aa)    
Predicted Functional Partners:
pqqE
annotation not available (372 aa)
 
   
  0.992
pqqC
Pyrroloquinoline-quinone synthase; Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ (245 aa)
 
   
  0.984
pqqB
Coenzyme PQQ synthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm (304 aa)
 
   
  0.972
JNHE01000027_gene3005
annotation not available (615 aa)
 
        0.893
JNHE01000067_gene4573
annotation not available (573 aa)
 
     
  0.741
JNHE01000051_gene2708
annotation not available (603 aa)
 
     
  0.739
JNHE01000008_gene3771
annotation not available (796 aa)
 
     
  0.698
JNHE01000027_gene3007
annotation not available (574 aa)
 
        0.682
JNHE01000027_gene3006
annotation not available (387 aa)
              0.624
JNHE01000051_gene2701
annotation not available (321 aa)
 
          0.571
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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