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JNHE01000027_gene3006 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000027_gene3006" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000027_gene3006annotation not available (387 aa)    
Predicted Functional Partners:
JNHE01000020_gene4016
annotation not available (346 aa)
   
  0.946
JNHE01000011_gene3656
annotation not available (343 aa)
   
  0.943
JNHE01000019_gene4163
annotation not available (370 aa)
   
  0.933
JNHE01000027_gene3007
annotation not available (574 aa)
 
   
  0.928
JNHE01000009_gene3312
Phosphate acetyltransferase; Involved in acetate metabolism; In the N-terminal section; belongs to the CobB/CobQ family (697 aa)
   
 
  0.904
JNHE01000040_gene78
annotation not available (476 aa)
   
 
  0.838
JNHE01000014_gene2995
annotation not available (810 aa)
   
 
  0.792
JNHE01000031_gene691
annotation not available (1155 aa)
       
  0.786
JNHE01000053_gene2687
annotation not available (566 aa)
       
  0.778
JNHE01000015_gene4376
annotation not available (450 aa)
   
 
  0.768
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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