STRINGSTRING
JNHE01000028_gene825 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000028_gene825" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000028_gene825annotation not available (238 aa)    
Predicted Functional Partners:
JNHE01000028_gene824
annotation not available (251 aa)
 
   
 
0.880
JNHE01000028_gene823
annotation not available (232 aa)
 
   
 
0.803
JNHE01000028_gene837
annotation not available (231 aa)
   
    0.697
JNHE01000003_gene1802
annotation not available (229 aa)
   
    0.697
JNHE01000018_gene3855
annotation not available (504 aa)
   
  0.634
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate (510 aa)
       
 
  0.629
JNHE01000003_gene2010
annotation not available (250 aa)
   
          0.628
JNHE01000021_gene4039
annotation not available (367 aa)
   
 
  0.542
hisF
Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit (256 aa)
              0.525
JNHE01000006_gene1155
annotation not available (2436 aa)
 
   
  0.513
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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