STRINGSTRING
JNHE01000028_gene847 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000028_gene847" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000028_gene847annotation not available (330 aa)    
Predicted Functional Partners:
JNHE01000100_gene983
annotation not available (164 aa)
 
  0.901
JNHE01000097_gene985
annotation not available (202 aa)
 
  0.900
JNHE01000090_gene2896
annotation not available (71 aa)
 
 
  0.882
JNHE01000090_gene2897
annotation not available (208 aa)
 
 
  0.882
JNHE01000003_gene1911
annotation not available (77 aa)
     
 
  0.708
JNHE01000008_gene3761
annotation not available (406 aa)
 
  0.639
JNHE01000028_gene845
annotation not available (588 aa)
 
   
    0.635
JNHE01000004_gene1569
annotation not available (426 aa)
 
  0.630
JNHE01000004_gene1708
annotation not available (425 aa)
 
  0.626
JNHE01000035_gene4223
annotation not available (431 aa)
 
  0.590
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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