STRINGSTRING
JNHE01000030_gene620 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000030_gene620" - annotation not available in Pseudomonas oleovorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000030_gene620annotation not available (256 aa)    
Predicted Functional Partners:
JNHE01000030_gene619
annotation not available (222 aa)
  0.999
metN
Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system (335 aa)
  0.999
JNHE01000018_gene3855
annotation not available (504 aa)
       
  0.744
JNHE01000016_gene4554
annotation not available (450 aa)
       
      0.730
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis (210 aa)
     
      0.703
JNHE01000003_gene2000
annotation not available (463 aa)
     
      0.689
JNHE01000001_gene268
annotation not available (380 aa)
     
      0.689
JNHE01000019_gene4106
annotation not available (241 aa)
     
      0.682
metE
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation (765 aa)
   
   
  0.626
znuC
Zinc import ATP-binding protein ZnuC; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family (262 aa)
       
  0.560
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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