STRINGSTRING
JNHE01000030_gene626 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000030_gene626" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000030_gene626annotation not available (205 aa)    
Predicted Functional Partners:
JNHE01000030_gene627
annotation not available (904 aa)
   
   
  0.845
JNHE01000030_gene622
annotation not available (196 aa)
   
   
  0.727
JNHE01000030_gene625
annotation not available (585 aa)
   
   
  0.688
JNHE01000030_gene624
annotation not available (438 aa)
   
   
  0.664
JNHE01000009_gene3253
annotation not available (720 aa)
     
   
  0.609
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (355 aa)
           
  0.608
JNHE01000030_gene623
annotation not available (439 aa)
   
   
  0.576
JNHE01000009_gene3252
annotation not available (353 aa)
           
  0.545
JNHE01000015_gene4448
annotation not available (724 aa)
     
   
  0.536
JNHE01000031_gene706
annotation not available (3642 aa)
     
        0.420
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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