STRINGSTRING
JNHE01000030_gene646 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000030_gene646" - annotation not available in Pseudomonas oleovorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000030_gene646annotation not available (50 aa)    
Predicted Functional Partners:
JNHE01000006_gene1029
annotation not available (1441 aa)
   
 
  0.974
JNHE01000001_gene438
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family (1311 aa)
     
 
  0.785
JNHE01000004_gene1639
annotation not available (183 aa)
   
          0.775
JNHE01000036_gene4324
annotation not available (109 aa)
   
          0.770
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family (953 aa)
     
 
  0.769
JNHE01000028_gene812
annotation not available (193 aa)
   
 
 
  0.754
JNHE01000018_gene3891
annotation not available (159 aa)
   
          0.744
JNHE01000002_gene2142
annotation not available (91 aa)
   
          0.732
JNHE01000003_gene1955
annotation not available (191 aa)
   
 
 
  0.712
JNHE01000002_gene2109
annotation not available (278 aa)
   
     
  0.690
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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