STRINGSTRING
JNHE01000030_gene659 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000030_gene659" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000030_gene659annotation not available (296 aa)    
Predicted Functional Partners:
JNHE01000030_gene662
annotation not available (186 aa)
   
        0.968
JNHE01000030_gene663
annotation not available (445 aa)
   
        0.950
JNHE01000030_gene661
annotation not available (77 aa)
              0.869
JNHE01000030_gene660
annotation not available (139 aa)
              0.865
JNHE01000002_gene2419
annotation not available (118 aa)
       
  0.850
JNHE01000002_gene2346
annotation not available (116 aa)
       
    0.845
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family (359 aa)
       
    0.838
JNHE01000008_gene3711
annotation not available (181 aa)
         
  0.819
JNHE01000002_gene2308
annotation not available (483 aa)
       
    0.818
JNHE01000018_gene3923
annotation not available (276 aa)
       
    0.815
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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