STRINGSTRING
JNHE01000030_gene663 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000030_gene663" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000030_gene663annotation not available (445 aa)    
Predicted Functional Partners:
pyrB
annotation not available (335 aa)
  0.998
carB
annotation not available (1073 aa)
 
  0.992
carA
annotation not available (349 aa)
 
 
  0.978
JNHE01000030_gene662
annotation not available (186 aa)
 
        0.967
pyrD
Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor (340 aa)
   
  0.957
JNHE01000030_gene659
annotation not available (296 aa)
   
        0.950
JNHE01000006_gene1028
annotation not available (472 aa)
 
  0.931
pyrF
Orotidine 5’-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5’- monophosphate (OMP) to uridine 5’-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily (262 aa)
   
   
  0.908
JNHE01000030_gene661
annotation not available (77 aa)
              0.882
JNHE01000030_gene660
annotation not available (139 aa)
         
  0.872
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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