STRINGSTRING
JNHE01000032_gene887 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000032_gene887" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000032_gene887annotation not available (688 aa)    
Predicted Functional Partners:
JNHE01000004_gene1588
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (189 aa)
         
  0.924
JNHE01000029_gene710
annotation not available (179 aa)
     
 
  0.873
JNHE01000001_gene246
annotation not available (203 aa)
         
  0.796
JNHE01000002_gene2090
annotation not available (401 aa)
         
  0.779
JNHE01000024_gene2443
annotation not available (552 aa)
         
  0.745
JNHE01000040_gene78
annotation not available (476 aa)
       
  0.743
astD
N-succinylglutamate 5-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate (487 aa)
         
  0.739
JNHE01000081_gene1348
annotation not available (436 aa)
         
  0.723
JNHE01000022_gene2578
annotation not available (190 aa)
         
  0.717
JNHE01000013_gene2795
annotation not available (488 aa)
         
  0.716
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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