STRINGSTRING
JNHE01000032_gene894 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000032_gene894" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000032_gene894annotation not available (230 aa)    
Predicted Functional Partners:
JNHE01000012_gene1396
annotation not available (217 aa)
     
 
  0.803
JNHE01000023_gene2515
annotation not available (78 aa)
     
 
  0.778
JNHE01000012_gene1395
annotation not available (570 aa)
   
      0.768
JNHE01000003_gene2000
annotation not available (463 aa)
       
 
  0.736
JNHE01000001_gene268
annotation not available (380 aa)
       
 
  0.736
JNHE01000042_gene3192
annotation not available (547 aa)
     
      0.715
JNHE01000001_gene478
annotation not available (587 aa)
     
      0.715
JNHE01000019_gene4106
annotation not available (241 aa)
       
 
  0.704
JNHE01000032_gene898
annotation not available (134 aa)
              0.571
JNHE01000018_gene3870
annotation not available (257 aa)
     
        0.553
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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