STRINGSTRING
JNHE01000032_gene898 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000032_gene898" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000032_gene898annotation not available (134 aa)    
Predicted Functional Partners:
JNHE01000032_gene897
annotation not available (182 aa)
 
  0.996
JNHE01000032_gene899
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (227 aa)
 
  0.995
JNHE01000032_gene896
annotation not available (449 aa)
 
  0.994
JNHE01000032_gene895
annotation not available (257 aa)
 
          0.959
JNHE01000032_gene900
annotation not available (365 aa)
 
 
 
  0.930
JNHE01000003_gene1859
annotation not available (210 aa)
 
  0.922
JNHE01000011_gene3676
annotation not available (265 aa)
 
  0.901
JNHE01000011_gene3674
annotation not available (229 aa)
 
  0.898
JNHE01000001_gene574
annotation not available (223 aa)
 
  0.896
JNHE01000006_gene1162
annotation not available (298 aa)
   
  0.887
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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