STRINGSTRING
JNHE01000034_gene4205 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000034_gene4205" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000034_gene4205annotation not available (387 aa)    
Predicted Functional Partners:
guaB
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family (489 aa)
   
 
    0.768
JNHE01000034_gene4206
annotation not available (312 aa)
              0.628
rhlB
ATP-dependent RNA helicase RhlB; DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA; Belongs to the DEAD box helicase family. RhlB subfamily (473 aa)
              0.543
JNHE01000001_gene424
annotation not available (264 aa)
          0.517
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP (205 aa)
       
    0.470
JNHE01000034_gene4203
annotation not available (375 aa)
   
        0.461
JNHE01000034_gene4208
annotation not available (219 aa)
              0.424
JNHE01000042_gene3211
annotation not available (222 aa)
     
        0.414
JNHE01000004_gene1637
annotation not available (219 aa)
     
        0.414
JNHE01000025_gene2850
annotation not available (271 aa)
     
        0.405
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
Server load: low (11%) [HD]