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JNHE01000035_gene4233 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000035_gene4233" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000035_gene4233annotation not available (239 aa)    
Predicted Functional Partners:
JNHE01000002_gene2365
annotation not available (314 aa)
       
  0.872
JNHE01000035_gene4231
annotation not available (233 aa)
   
        0.870
JNHE01000035_gene4232
annotation not available (381 aa)
   
        0.857
JNHE01000034_gene4195
annotation not available (393 aa)
     
  0.756
JNHE01000035_gene4234
annotation not available (295 aa)
              0.595
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho’s RNA-dependent ATPase activity, and release of the mRNA from the DNA template (419 aa)
       
      0.582
JNHE01000002_gene2276
annotation not available (663 aa)
       
  0.488
moaA
GTP 3’,8-cyclase; Catalyzes the cyclization of GTP to (8S)-3’,8-cyclo-7,8- dihydroguanosine 5’-triphosphate; Belongs to the radical SAM superfamily. MoaA family (331 aa)
 
   
  0.485
moaC
Cyclic pyranopterin monophosphate synthase; Catalyzes the conversion of (8S)-3’,8-cyclo-7,8- dihydroguanosine 5’-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family (158 aa)
 
     
  0.442
JNHE01000035_gene4236
annotation not available (292 aa)
              0.438
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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