STRINGSTRING
JNHE01000036_gene4307 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000036_gene4307" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000036_gene4307annotation not available (283 aa)    
Predicted Functional Partners:
JNHE01000036_gene4305
annotation not available (275 aa)
 
 
  0.995
JNHE01000036_gene4304
annotation not available (254 aa)
 
 
  0.995
JNHE01000036_gene4306
annotation not available (266 aa)
 
 
  0.991
JNHE01000050_gene2721
annotation not available (260 aa)
 
 
  0.971
phnC
Phosphonates import ATP-binding protein PhnC; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family (274 aa)
 
 
  0.940
JNHE01000050_gene2720
annotation not available (333 aa)
   
   
 
0.784
JNHE01000050_gene2728
annotation not available (238 aa)
 
 
  0.755
JNHE01000050_gene2727
annotation not available (269 aa)
 
 
  0.715
JNHE01000050_gene2726
Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1-methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose (289 aa)
 
   
  0.667
JNHE01000036_gene4308
annotation not available (281 aa)
              0.596
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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