STRINGSTRING
JNHE01000036_gene4316 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000036_gene4316" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000036_gene4316annotation not available (63 aa)    
Predicted Functional Partners:
JNHE01000004_gene1576
annotation not available (58 aa)
   
          0.750
JNHE01000057_gene105
annotation not available (154 aa)
   
          0.732
JNHE01000011_gene3678
annotation not available (362 aa)
   
          0.712
JNHE01000009_gene3400
annotation not available (63 aa)
   
          0.646
JNHE01000004_gene1585
annotation not available (395 aa)
   
          0.640
JNHE01000030_gene654
annotation not available (116 aa)
   
          0.609
JNHE01000004_gene1751
annotation not available (135 aa)
   
          0.596
JNHE01000005_gene999
annotation not available (106 aa)
   
          0.591
JNHE01000011_gene3602
annotation not available (111 aa)
   
          0.582
JNHE01000024_gene2464
annotation not available (62 aa)
   
          0.577
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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