STRINGSTRING
JNHE01000036_gene4342 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000036_gene4342" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000036_gene4342annotation not available (669 aa)    
Predicted Functional Partners:
JNHE01000036_gene4341
annotation not available (415 aa)
              0.685
JNHE01000036_gene4343
annotation not available (158 aa)
              0.608
JNHE01000009_gene3296
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA (558 aa)
     
      0.534
JNHE01000014_gene2988
annotation not available (114 aa)
           
  0.530
JNHE01000036_gene4344
annotation not available (136 aa)
              0.442
JNHE01000014_gene2907
annotation not available (764 aa)
   
        0.435
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family (370 aa)
     
    0.424
JNHE01000022_gene2647
annotation not available (336 aa)
     
    0.424
JNHE01000014_gene3000
annotation not available (650 aa)
       
      0.403
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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