STRINGSTRING
JNHE01000037_gene4296 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000037_gene4296" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000037_gene4296annotation not available (677 aa)    
Predicted Functional Partners:
JNHE01000006_gene1029
annotation not available (1441 aa)
       
  0.948
JNHE01000016_gene4561
annotation not available (714 aa)
 
 
  0.933
fadB
Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family (696 aa)
 
 
  0.923
JNHE01000037_gene4295
annotation not available (143 aa)
 
  0.920
JNHE01000010_gene3525
annotation not available (120 aa)
   
  0.914
JNHE01000009_gene3254
annotation not available (105 aa)
   
  0.914
JNHE01000002_gene2313
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family (507 aa)
       
    0.861
JNHE01000001_gene456
annotation not available (261 aa)
   
  0.842
JNHE01000002_gene2095
annotation not available (1236 aa)
       
  0.839
JNHE01000020_gene3979
annotation not available (201 aa)
     
  0.837
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
Server load: low (11%) [HD]