STRINGSTRING
JNHE01000038_gene3 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000038_gene3" - annotation not available in Pseudomonas oleovorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000038_gene3annotation not available (416 aa)    
Predicted Functional Partners:
JNHE01000038_gene5
annotation not available (1007 aa)
 
  0.994
JNHE01000038_gene4
annotation not available (108 aa)
 
  0.993
JNHE01000038_gene6
annotation not available (209 aa)
 
 
    0.990
JNHE01000004_gene1556
annotation not available (970 aa)
  0.982
JNHE01000004_gene1555
annotation not available (103 aa)
 
 
    0.978
JNHE01000004_gene1557
annotation not available (225 aa)
 
  0.918
JNHE01000038_gene2
annotation not available (129 aa)
   
 
  0.901
JNHE01000006_gene1090
annotation not available (686 aa)
 
 
  0.900
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family (953 aa)
     
 
  0.855
JNHE01000041_gene3149
L-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde (346 aa)
   
 
    0.854
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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