STRINGSTRING
JNHE01000038_gene8 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000038_gene8" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000038_gene8annotation not available (393 aa)    
Predicted Functional Partners:
JNHE01000002_gene2090
annotation not available (401 aa)
   
  0.929
JNHE01000019_gene4163
annotation not available (370 aa)
   
 
0.911
JNHE01000001_gene188
annotation not available (347 aa)
       
    0.902
JNHE01000040_gene78
annotation not available (476 aa)
   
  0.867
JNHE01000001_gene174
annotation not available (953 aa)
       
  0.863
JNHE01000018_gene3852
annotation not available (280 aa)
     
  0.845
JNHE01000081_gene1348
annotation not available (436 aa)
   
  0.845
JNHE01000015_gene4376
annotation not available (450 aa)
   
  0.838
JNHE01000015_gene4378
annotation not available (497 aa)
   
  0.833
JNHE01000001_gene176
annotation not available (575 aa)
       
  0.828
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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