STRINGSTRING
JNHE01000042_gene3184 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000042_gene3184" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000042_gene3184annotation not available (344 aa)    
Predicted Functional Partners:
JNHE01000042_gene3185
annotation not available (302 aa)
  0.998
JNHE01000042_gene3186
annotation not available (263 aa)
 
 
  0.991
JNHE01000042_gene3187
annotation not available (274 aa)
 
   
    0.960
leuC
3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate; Belongs to the aconitase/IPM isomerase family. LeuC type 1 subfamily (475 aa)
   
  0.959
JNHE01000009_gene3387
annotation not available (469 aa)
   
  0.919
JNHE01000015_gene4368
annotation not available (264 aa)
 
 
  0.880
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (359 aa)
   
  0.851
JNHE01000015_gene4366
annotation not available (282 aa)
 
   
    0.827
JNHE01000015_gene4364
annotation not available (302 aa)
 
 
  0.818
JNHE01000002_gene2156
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family (762 aa)
   
 
  0.777
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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