STRINGSTRING
JNHE01000042_gene3187 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000042_gene3187" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000042_gene3187annotation not available (274 aa)    
Predicted Functional Partners:
JNHE01000042_gene3186
annotation not available (263 aa)
 
   
  0.989
JNHE01000042_gene3185
annotation not available (302 aa)
 
   
  0.971
JNHE01000042_gene3184
annotation not available (344 aa)
 
   
    0.960
JNHE01000015_gene4367
annotation not available (308 aa)
 
   
  0.857
JNHE01000001_gene477
annotation not available (386 aa)
 
 
    0.821
JNHE01000015_gene4368
annotation not available (264 aa)
 
   
  0.783
JNHE01000011_gene3592
annotation not available (539 aa)
       
  0.744
JNHE01000042_gene3192
annotation not available (547 aa)
   
   
  0.732
JNHE01000001_gene438
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family (1311 aa)
     
    0.728
JNHE01000042_gene3199
annotation not available (351 aa)
   
     
  0.715
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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