STRINGSTRING
JNHE01000042_gene3189 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000042_gene3189" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000042_gene3189annotation not available (119 aa)    
Predicted Functional Partners:
JNHE01000042_gene3192
annotation not available (547 aa)
 
   
    0.934
JNHE01000001_gene478
annotation not available (587 aa)
 
   
    0.895
JNHE01000042_gene3199
annotation not available (351 aa)
   
     
  0.786
JNHE01000042_gene3190
annotation not available (375 aa)
 
          0.778
JNHE01000001_gene477
annotation not available (386 aa)
 
          0.773
JNHE01000042_gene3193
annotation not available (251 aa)
 
   
    0.738
JNHE01000042_gene3187
annotation not available (274 aa)
   
     
  0.688
JNHE01000001_gene479
annotation not available (340 aa)
   
     
  0.646
JNHE01000002_gene2099
annotation not available (579 aa)
   
          0.622
JNHE01000002_gene2122
annotation not available (597 aa)
   
          0.526
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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